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T05A10.6 DUF19 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 188097, updated on 18-Sep-2024

Summary

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Official Symbol
T05A10.6
Official Full Name
DUF19 domain-containing protein
Primary source
WormBase:WBGene00011463
Locus tag
CELE_T05A10.6
See related
AllianceGenome:WB:WBGene00011463
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See T05A10.6 in Genome Data Viewer
Location:
chromosome: X
Exon count:
6
Sequence:
Chromosome: X; NC_003284.9 (10792898..10794747, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Transcription factor sma-9 Neighboring gene CLaudin-like in Caenorhabditis Neighboring gene Transthyretin-like family protein Neighboring gene SCP domain-containing protein Neighboring gene ncRNA Neighboring gene 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1;Phosphoinositide phospholipase C Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
DUF19 domain-containing protein
NP_509804.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    10792898..10794747 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_077403.6 → NP_509804.2  DUF19 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_509804.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    P90960
    Conserved Domains (1) summary
    cl00133
    Location:63 → 140
    SCP; SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes. This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in ...
Nucleotide Protein
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