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glb-25 Globin domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 188156, updated on 2-Nov-2024

Summary

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Official Symbol
glb-25
Official Full Name
Globin domain-containing protein
Primary source
WormBase:WBGene00020279
Locus tag
CELE_T06A1.4
See related
AllianceGenome:WB:WBGene00020279
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable oxygen binding activity and oxygen carrier activity. Predicted to be involved in oxygen transport and response to hypoxia. Is expressed in head neurons; lateral nerve cord; tail neurons; ventral cord neurons; and ventral nerve cord. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See glb-25 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (1944955..1953742)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Glycosyltransferase family 92 protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Wide diversity in structure and expression profiles among members of the Caenorhabditis elegans globin protein family. Hoogewijs D, et al. BMC Genomics, 2007 Oct 4. PMID 17916248, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
  
enables oxygen binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables oxygen binding IEA
Inferred from Electronic Annotation
more info
  
enables oxygen carrier activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in oxygen transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in response to hypoxia IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Globin domain-containing protein
NP_001300185.1
  • Confirmed by transcript evidence
NP_001300186.1
  • Confirmed by transcript evidence
NP_503535.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    1944955..1953742
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071134.6 → NP_503535.2  Globin domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503535.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EGB6
    Conserved Domains (1) summary
    cd14766
    Location:41 → 183
    CeGLB25-like; Caenorhabditis elegans globin GLB-25, and related globins

  2. NM_001313256.3 → NP_001300185.1  Globin domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3ASU6
    Conserved Domains (1) summary
    cl21461
    Location:1 → 125
    Globin-like; Globin-like protein superfamily

  3. NM_001313257.3 → NP_001300186.1  Globin domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AV45
    Conserved Domains (1) summary
    cl21461
    Location:43 → 185
    Globin-like; Globin-like protein superfamily
Nucleotide Protein
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