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T13A10.2 RING-type domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 188459, updated on 2-Nov-2024

Summary

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Official Symbol
T13A10.2
Official Full Name
RING-type domain-containing protein
Primary source
WormBase:WBGene00020469
Locus tag
CELE_T13A10.2
See related
AllianceGenome:WB:WBGene00020469
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable metal ion binding activity. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See T13A10.2 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_003282.8 (6253300..6253785)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Acyl-coenzyme A oxidase acox-3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene Histidine-rich glycoprotein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
RING-type domain-containing protein
NP_500945.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    6253300..6253785
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_068544.3 → NP_500945.1  RING-type domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_500945.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q22441
    Conserved Domains (3) summary
    TIGR02169
    Location:14 → 92
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    cd00162
    Location:97 → 142
    RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
    cl17238
    Location:97 → 142
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
Nucleotide Protein
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