U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

srt-55 Serpentine receptor class T-55 [ Caenorhabditis elegans ]

Gene ID: 188561, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
srt-55
Official Full Name
Serpentine receptor class T-55
Primary source
WormBase:WBGene00011816
Locus tag
CELE_T16H12.8
See related
AllianceGenome:WB:WBGene00011816
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See srt-55 in Genome Data Viewer
Location:
chromosome: III
Exon count:
6
Sequence:
Chromosome: III; NC_003281.10 (10104841..10106490, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Kelch repeat-containing protein kel-10 Neighboring gene pseudo Neighboring gene Uncharacterized protein Neighboring gene Vacuolar protein sorting-associated protein 29 Neighboring gene Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Serpentine receptor class T-55
NP_499243.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    10104841..10106490 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_066842.1 → NP_499243.1  Serpentine receptor class T-55 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_499243.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34571
    Conserved Domains (1) summary
    pfam10321
    Location:48 → 337
    7TM_GPCR_Srt; Serpentine type 7TM GPCR chemoreceptor Srt
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P34571.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools