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pals-25 Protein containing ALS2cr12 (ALS2CR12) signature [ Caenorhabditis elegans ]

Gene ID: 188564, updated on 2-Nov-2024

Summary

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Official Symbol
pals-25
Official Full Name
Protein containing ALS2cr12 (ALS2CR12) signature
Primary source
WormBase:WBGene00020540
Locus tag
CELE_T17A3.2
See related
AllianceGenome:WB:WBGene00020540
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in several structures, including hypodermis; intestine; nervous system; and pharynx. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See pals-25 in Genome Data Viewer
Location:
chromosome: III
Exon count:
5
Sequence:
Chromosome: III; NC_003281.10 (134494..137975)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Retrotrans_gag domain-containing protein Neighboring gene F-box associated domain-containing protein Neighboring gene F-box domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Antagonistic paralogs control a switch between growth and pathogen resistance in C. elegans. Reddy KC, et al. PLoS Pathog, 2019 Jan. PMID 30640956, Free PMC Article
  2. Balancing Selection of the Intracellular Pathogen Response in Natural Caenorhabditis elegans Populations. van Sluijs L, et al. Front Cell Infect Microbiol, 2021. PMID 35174100, Free PMC Article
  3. A pals-25 gain-of-function allele triggers systemic resistance against natural pathogens of C. elegans. Gang SS, et al. PLoS Genet, 2022 Oct. PMID 36191002, Free PMC Article
  4. A cullin-RING ubiquitin ligase promotes thermotolerance as part of the intracellular pathogen response in Caenorhabditis elegans. Panek J, et al. Proc Natl Acad Sci U S A, 2020 Apr 7. PMID 32193347, Free PMC Article
  5. Heat Stress Reduces the Susceptibility of Caenorhabditis elegans to Orsay Virus Infection. Huang Y, et al. Genes (Basel), 2021 Jul 28. PMID 34440335, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

General protein information

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Preferred Names
Protein containing ALS2cr12 (ALS2CR12) signature
NP_497153.2
  • Confirmed by transcript evidence;
    Product from WormBase gene class pals

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    134494..137975
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_064752.5 → NP_497153.2  Protein containing ALS2cr12 (ALS2CR12) signature [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_497153.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    G4S455, Q3V5H4
Nucleotide Protein
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