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Pmp2 peripheral myelin protein 2 [ Mus musculus (house mouse) ]

Gene ID: 18857, updated on 2-Nov-2024

Summary

Official Symbol
Pmp2provided by MGI
Official Full Name
peripheral myelin protein 2provided by MGI
Primary source
MGI:MGI:102667
See related
Ensembl:ENSMUSG00000052468 AllianceGenome:MGI:102667
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
P2
Summary
Predicted to enable cholesterol binding activity and fatty acid binding activity. Acts upstream of or within membrane organization. Predicted to be located in cytoplasm and myelin sheath. Predicted to be active in cytosol and nucleus. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease type 1G. Orthologous to human PMP2 (peripheral myelin protein 2). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in testis adult (RPKM 1.3) and mammary gland adult (RPKM 0.5) See more
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Genomic context

See Pmp2 in Genome Data Viewer
Location:
3 A1; 3 2.54 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (10244911..10248945, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (10179851..10183885, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 33365 Neighboring gene myelin expression factor 2 like Neighboring gene STARR-seq mESC enhancer starr_06935 Neighboring gene fatty acid binding protein 9, testis Neighboring gene fatty acid binding protein 4, adipocyte

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Targeted (2) 

General gene information

Markers

Potential readthrough

Included gene: Fabp9

Clone Names

  • MGC117795

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables cholesterol binding ISO
Inferred from Sequence Orthology
more info
 
enables cholesterol binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables fatty acid binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables fatty acid binding ISO
Inferred from Sequence Orthology
more info
 
enables fatty acid binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in fatty acid transport IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within membrane organization IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in myelin sheath IEA
Inferred from Electronic Annotation
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030305.2NP_001025476.1  myelin P2 protein

    See identical proteins and their annotated locations for NP_001025476.1

    Status: PROVISIONAL

    Source sequence(s)
    AC113990
    Consensus CDS
    CCDS17236.1
    UniProtKB/Swiss-Prot
    P24526, Q4KL10
    Related
    ENSMUSP00000029034.7, ENSMUST00000029034.9
    Conserved Domains (1) summary
    pfam00061
    Location:6132
    Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    10244911..10248945 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)