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T22B3.3 Major sperm protein [ Caenorhabditis elegans ]

Gene ID: 188722, updated on 2-Nov-2024

Summary

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Official Symbol
T22B3.3
Official Full Name
Major sperm protein
Primary source
WormBase:WBGene00011911
Locus tag
CELE_T22B3.3
See related
AllianceGenome:WB:WBGene00011911
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in cytoskeleton. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See T22B3.3 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_003282.8 (11703228..11703785, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene CidA/LrgA family protein Neighboring gene Calcineurin-like phosphoesterase domain-containing protein;Inner membrane protein Neighboring gene Protein dumpy-20 Neighboring gene Argonaute (plant)-Like Gene Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Major sperm protein
NP_001366755.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    11703228..11703785 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001380467.1 → NP_001366755.1  Major sperm protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q22660
    Conserved Domains (1) summary
    pfam00635
    Location:13 → 104
    Motile_Sperm; MSP (Major sperm protein) domain
Nucleotide Protein
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