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srr-2 Gustatory receptor [ Caenorhabditis elegans ]

Gene ID: 188953, updated on 2-Nov-2024

Summary

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Official Symbol
srr-2
Official Full Name
Gustatory receptor
Primary source
WormBase:WBGene00005653
Locus tag
CELE_T26H2.8
See related
AllianceGenome:WB:WBGene00005653
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Is expressed in intestine; isthmus; and terminal bulb. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See srr-2 in Genome Data Viewer
Location:
chromosome: V
Exon count:
8
Sequence:
Chromosome: V; NC_003283.11 (19213667..19217176, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Histidine-rich glycoprotein-like Neighboring gene ncRNA Neighboring gene Nuclear hormone receptor family member nhr-79;Nuclear receptor domain-containing protein Neighboring gene Acyl_transf_3 domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Gustatory receptor
NP_507735.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    19213667..19217176 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_075334.3 → NP_507735.1  Gustatory receptor [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_507735.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O18140
    Conserved Domains (1) summary
    pfam03268
    Location:17 → 370
    DUF267; Caenorhabditis protein of unknown function, DUF267
Nucleotide Protein
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