U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

glb-27 Globin domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 189091, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
glb-27
Official Full Name
Globin domain-containing protein
Primary source
WormBase:WBGene00012178
Locus tag
CELE_W01C9.5
See related
AllianceGenome:WB:WBGene00012178
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable oxygen binding activity and oxygen carrier activity. Predicted to be involved in oxygen transport and response to hypoxia. Is expressed in head neurons; lateral nerve cord; tail neurons; ventral cord neurons; and ventral nerve cord. [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See glb-27 in Genome Data Viewer
Location:
chromosome: II
Exon count:
6
Sequence:
Chromosome: II; NC_003280.10 (8547337..8556266, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Prion-like-(Q/N-rich)-domain-bearing protein Neighboring gene putative 2,4-dienoyl-CoA reductase decr-1.2 [(3E)-enoyl-CoA-producing] Neighboring gene ncRNA Neighboring gene Eukaryotic translation initiation factor 5A-2 Neighboring gene ncRNA Neighboring gene PID domain-containing protein Neighboring gene Heat shock 70 kDa protein 13

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. High neural activity accelerates the decline of cognitive plasticity with age in Caenorhabditis elegans. Li Q, et al. Elife, 2020 Nov 24. PMID 33228848, Free PMC Article
  2. The Caenorhabditis globin gene family reveals extensive nematode-specific radiation and diversification. Hoogewijs D, et al. BMC Evol Biol, 2008 Oct 9. PMID 18844991, Free PMC Article
  3. Wide diversity in structure and expression profiles among members of the Caenorhabditis elegans globin protein family. Hoogewijs D, et al. BMC Genomics, 2007 Oct 4. PMID 17916248, Free PMC Article
  4. A genomewide RNAi screen for genes that affect the stability, distribution and function of P granules in Caenorhabditis elegans. Updike DL, et al. Genetics, 2009 Dec. PMID 19805813, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
  
enables oxygen binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables oxygen binding IEA
Inferred from Electronic Annotation
more info
  
enables oxygen carrier activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables oxygen carrier activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in oxygen transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in oxygen transport IEA
Inferred from Electronic Annotation
more info
  
involved_in response to hypoxia IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Globin domain-containing protein
NP_001300484.1
  • Confirmed by transcript evidence
NP_001300599.1
  • Confirmed by transcript evidence
NP_495806.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    8547337..8556266 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063405.4 → NP_495806.1  Globin domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495806.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q23117
    Conserved Domains (1) summary
    cd01040
    Location:32 → 166
    Mb_like; myoglobin_like; M family globin domain

  2. NM_001313555.3 → NP_001300484.1  Globin domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3ATU3
    Conserved Domains (1) summary
    cd01040
    Location:88 → 222
    Mb_like; myoglobin_like; M family globin domain

  3. NM_001313670.4 → NP_001300599.1  Globin domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AU27
    Conserved Domains (1) summary
    cd01040
    Location:68 → 202
    Mb_like; myoglobin_like; M family globin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools