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srh-271 Serpentine Receptor, class H [ Caenorhabditis elegans ]

Gene ID: 189138, updated on 2-Nov-2024

Summary

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Official Symbol
srh-271
Official Full Name
Serpentine Receptor, class H
Primary source
WormBase:WBGene00005477
Locus tag
CELE_W02H5.6
See related
AllianceGenome:WB:WBGene00005477
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See srh-271 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (2618950..2621979, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene AcetylCholine Receptor;Neur_chan_memb domain-containing protein Neighboring gene MOSC domain-containing protein Neighboring gene ncRNA Neighboring gene BZIP domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene G_PROTEIN_RECEP_F1_2 domain-containing protein;Serpentine Receptor, class I

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine Receptor, class H
NP_503718.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    2618950..2621979 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071317.4 → NP_503718.1  Serpentine Receptor, class H [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503718.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9N5D1
    Conserved Domains (1) summary
    pfam10318
    Location:7 → 307
    7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

RNA

  1. NR_133612.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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