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pals-33 Protein containing ALS2cr12 (ALS2CR12) signature [ Caenorhabditis elegans ]

Gene ID: 189288, updated on 17-Oct-2024

Summary

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Official Symbol
pals-33
Official Full Name
Protein containing ALS2cr12 (ALS2CR12) signature
Primary source
WormBase:WBGene00021081
Locus tag
CELE_W08A12.4
See related
AllianceGenome:WB:WBGene00021081
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See pals-33 in Genome Data Viewer
Location:
chromosome: V
Exon count:
12
Sequence:
Chromosome: V; NC_003283.11 (3673380..3676632)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Rab5-bind domain-containing protein;Viral A-type inclusion protein;tRNA dihydrouridine synthase DusB Neighboring gene DUF3523 domain-containing protein Neighboring gene pseudo Neighboring gene Uncharacterized protein Neighboring gene Neuropeptide-Like Protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The purine nucleoside phosphorylase pnp-1 regulates epithelial cell resistance to infection in C. elegans. Tecle E, et al. PLoS Pathog, 2021 Apr. PMID 33878133, Free PMC Article
  2. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
  3. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
  4. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Protein containing ALS2cr12 (ALS2CR12) signature
NP_504026.3
  • Product from WormBase gene class pals;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    3673380..3676632
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071625.3 → NP_504026.3  Protein containing ALS2cr12 (ALS2CR12) signature [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    O01622
    Conserved Domains (1) summary
    PTZ00121
    Location:100 → 320
    PTZ00121; MAEBL; Provisional
Nucleotide Protein
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