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Y9C9A.16 FAD/NAD(P)-binding domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 189421, updated on 2-Nov-2024

Summary

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Official Symbol
Y9C9A.16
Official Full Name
FAD/NAD(P)-binding domain-containing protein
Primary source
WormBase:WBGene00021183
Locus tag
CELE_Y9C9A.16
See related
AllianceGenome:WB:WBGene00021183
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable FAD binding activity and sulfide:quinone oxidoreductase activity. Predicted to be involved in sulfide oxidation, using sulfide:quinone oxidoreductase. Predicted to be active in mitochondrion. Orthologous to human SQOR (sulfide quinone oxidoreductase). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Y9C9A.16 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
8
Sequence:
Chromosome: IV; NC_003282.8 (4973521..4976125, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene CYLiCin homologue Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables FAD binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables sulfide:quinone oxidoreductase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in sulfide oxidation, using sulfide:quinone oxidoreductase IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
FAD/NAD(P)-binding domain-containing protein
NP_001263749.1
  • Confirmed by transcript evidence
NP_500688.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    4973521..4976125 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001276820.3 → NP_001263749.1  FAD/NAD(P)-binding domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001263749.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    J7SF87
    Conserved Domains (1) summary
    COG0446
    Location:21 → 355
    FadH2; NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism]

  2. NM_068287.5 → NP_500688.2  FAD/NAD(P)-binding domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_500688.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9N2S1
    Conserved Domains (1) summary
    COG0446
    Location:20 → 294
    FadH2; NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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