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ippk-1 Inositol-pentakisphosphate 2-kinase [ Caenorhabditis elegans ]

Gene ID: 189456, updated on 2-Nov-2024

Summary

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Official Symbol
ippk-1
Official Full Name
Inositol-pentakisphosphate 2-kinase
Primary source
WormBase:WBGene00012466
Locus tag
CELE_Y17G7B.13
See related
AllianceGenome:WB:WBGene00012466
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable inositol-1,3,4,5,6-pentakisphosphate 2-kinase activity. Predicted to be involved in inositol phosphate biosynthetic process. Predicted to be active in nucleus. Orthologous to human IPPK (inositol-pentakisphosphate 2-kinase). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See ippk-1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
8
Sequence:
Chromosome: II; NC_003280.10 (12042910..12049260)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Triosephosphate isomerase Neighboring gene ncRNA Neighboring gene NAD kinase 2, mitochondrial Neighboring gene Arrestin C-terminal-like domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  3. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables inositol-1,3,4,5,6-pentakisphosphate 2-kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables inositol-1,3,4,5,6-pentakisphosphate 2-kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in inositol phosphate biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Inositol-pentakisphosphate 2-kinase
NP_496564.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    12042910..12049260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_064163.6 → NP_496564.2  Inositol-pentakisphosphate 2-kinase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496564.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XXI1
    Conserved Domains (1) summary
    pfam06090
    Location:21 → 424
    Ins_P5_2-kin; Inositol-pentakisphosphate 2-kinase
Nucleotide Protein
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