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Pnliprp2 pancreatic lipase-related protein 2 [ Mus musculus (house mouse) ]

Gene ID: 18947, updated on 2-Nov-2024

Summary

Official Symbol
Pnliprp2provided by MGI
Official Full Name
pancreatic lipase-related protein 2provided by MGI
Primary source
MGI:MGI:1336202
See related
Ensembl:ENSMUSG00000025091 AllianceGenome:MGI:1336202
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
PLRP2
Summary
Enables triacylglycerol lipase activity. Acts upstream of or within cellular defense response; intestinal lipid catabolic process; and response to bacterium. Predicted to be located in neuron projection and zymogen granule membrane. Predicted to be active in extracellular space. Is expressed in pancreas tip epithelium. Orthologous to human PNLIPRP2 (pancreatic lipase related protein 2 (gene/pseudogene)). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in small intestine adult (RPKM 66.4), stomach adult (RPKM 31.6) and 4 other tissues See more
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Genomic context

See Pnliprp2 in Genome Data Viewer
Location:
19 D2; 19 54.5 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (58748155..58765966)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (58759723..58777534)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1810018F18 gene Neighboring gene pancreatic lipase related protein 1 Neighboring gene STARR-seq mESC enhancer starr_46584 Neighboring gene predicted gene, 52394 Neighboring gene sperm microtubule inner protein 5

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Targeted (2)  1 citation

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables calcium ion binding ISO
Inferred from Sequence Orthology
more info
 
enables calcium ion binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables galactolipase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables galactolipase activity IEA
Inferred from Electronic Annotation
more info
 
enables galactolipase activity ISO
Inferred from Sequence Orthology
more info
 
enables galactolipase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables lipase activity ISO
Inferred from Sequence Orthology
more info
 
enables monoacylglycerol lipase activity ISO
Inferred from Sequence Orthology
more info
 
enables monoacylglycerol lipase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables phospholipase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables phospholipase activity ISO
Inferred from Sequence Orthology
more info
 
enables phospholipase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables triacylglycerol lipase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables triacylglycerol lipase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables triacylglycerol lipase activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within cellular defense response IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in galactolipid catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in galactolipid catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within intestinal lipid catabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in phosphatidylcholine catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in phosphatidylcholine catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in phospholipid catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in phospholipid catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in phospholipid catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in phospholipid metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in phospholipid metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within response to bacterium IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in triglyceride catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in triglyceride catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in triglyceride catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 
located_in extracellular space ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in neuron projection ISO
Inferred from Sequence Orthology
more info
 
located_in neuron projection ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in zymogen granule membrane IEA
Inferred from Electronic Annotation
more info
 
located_in zymogen granule membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
pancreatic lipase-related protein 2
Names
PL-RP2
cytotoxic T-lymphocyte lipase
galactolipase
triacylglycerol lipase
NP_035258.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011128.2NP_035258.2  pancreatic lipase-related protein 2 precursor

    See identical proteins and their annotated locations for NP_035258.2

    Status: VALIDATED

    Source sequence(s)
    AK008021, AK131882, BC094923
    Consensus CDS
    CCDS38030.1
    UniProtKB/Swiss-Prot
    P17892, Q4VBW7
    Related
    ENSMUSP00000026081.4, ENSMUST00000026081.5
    Conserved Domains (3) summary
    cd00707
    Location:65363
    Pancreat_lipase_like; Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the ...
    cd01759
    Location:370482
    PLAT_PL; PLAT/LH2 domain of pancreatic triglyceride lipase. Lipases hydrolyze phospholipids and triglycerides to generate fatty acids for energy production or for storage and to release inositol phosphates that act as second messengers. The central role of ...
    pfam00151
    Location:31367
    Lipase; Lipase

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    58748155..58765966
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)