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capa-1 LYMARV-amide [ Caenorhabditis elegans ]

Gene ID: 189521, updated on 2-Nov-2024

Summary

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Official Symbol
capa-1
Official Full Name
LYMARV-amide
Primary source
WormBase:WBGene00021268
Locus tag
CELE_Y23B4A.2
See related
AllianceGenome:WB:WBGene00021268
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Enables G protein-coupled receptor binding activity. Involved in neuropeptide signaling pathway. Is expressed in neurons. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See capa-1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
3
Sequence:
Chromosome: X; NC_003284.9 (5919760..5920494)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Neuromedin U signaling regulates retrieval of learned salt avoidance in a C. elegans gustatory circuit. Watteyne J, et al. Nat Commun, 2020 Apr 29. PMID 32350283, Free PMC Article
  2. A neuromedin-pyrokinin-like neuropeptide signaling system in Caenorhabditis elegans. Lindemans M, et al. Biochem Biophys Res Commun, 2009 Feb 13. PMID 19133232
  3. Most Caenorhabditis elegans microRNAs are individually not essential for development or viability. Miska EA, et al. PLoS Genet, 2007 Dec. PMID 18085825, Free PMC Article
  4. The neuropeptidergic connectome of C. elegans. Ripoll-Sánchez L, et al. Neuron, 2023 Nov 15. PMID 37935195, Free PMC Article
  5. System-wide mapping of peptide-GPCR interactions in C. elegans. Beets I, et al. Cell Rep, 2023 Sep 26. PMID 37656621, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The neuromedin U homolog CAPA-1 and its receptor NMUR-1 are required for the retrieval of learned salt avoidance.
    Title: Neuromedin U signaling regulates retrieval of learned salt avoidance in a C. elegans gustatory circuit.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables G protein-coupled receptor binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in neuropeptide signaling pathway IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in neuropeptide signaling pathway IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
LYMARV-amide
NP_001370577.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    5919760..5920494
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001383591.2 → NP_001370577.1  LYMARV-amide [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9N563
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9N563.1

Gene LinkOut

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