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clc-23 Transmembrane 9 superfamily member [ Caenorhabditis elegans ]

Gene ID: 189591, updated on 2-Nov-2024

Summary

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Official Symbol
clc-23
Official Full Name
Transmembrane 9 superfamily member
Primary source
WormBase:WBGene00021336
Locus tag
CELE_Y34F4.1
See related
AllianceGenome:WB:WBGene00021336
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See clc-23 in Genome Data Viewer
Location:
chromosome: III
Exon count:
4
Sequence:
Chromosome: III; NC_003281.10 (1020954..1021882)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Serpentine receptor class gamma Neighboring gene PAP-associated domain-containing protein Neighboring gene Transmembrane protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Transmembrane 9 superfamily member
NP_001122725.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    1020954..1021882
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001129253.3 → NP_001122725.1  Transmembrane 9 superfamily member [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001122725.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8W7W0
    Conserved Domains (1) summary
    pfam06653
    Location:84 → 156
    Claudin_3; Tight junction protein, Claudin-like
Nucleotide Protein
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