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dyf-17 Verprolin [ Caenorhabditis elegans ]

Gene ID: 189733, updated on 2-Nov-2024

Summary

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Official Symbol
dyf-17
Official Full Name
Verprolin
Primary source
WormBase:WBGene00012673
Locus tag
CELE_Y39B6A.11
See related
AllianceGenome:WB:WBGene00012673
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Located in ciliary transition zone. Is expressed in nervous system. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See dyf-17 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (19127525..19131014)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene BED-type domain-containing protein Neighboring gene ncRNA Neighboring gene tRNA-Phe Neighboring gene Uncharacterized protein Neighboring gene Glycine-rich cell wall structural protein 1.8-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptional profiling of C. elegans DAF-19 uncovers a ciliary base-associated protein and a CDK/CCRK/LF2p-related kinase required for intraflagellar transport. Phirke P, et al. Dev Biol, 2011 Sep 1. PMID 21740898, Free PMC Article
  2. The C. elegans regulatory factor X (RFX) DAF-19M module: A shift from general ciliogenesis to cell-specific ciliary and behavioral specialization. Ahn S, et al. Cell Rep, 2022 Apr 12. PMID 35417689
  3. The relationship between intraflagellar transport and upstream protein trafficking pathways and macrocyclic lactone resistance in Caenorhabditis elegans. Brinzer RA, et al. G3 (Bethesda), 2024 Mar 6. PMID 38227795, Free PMC Article
  4. SH3 interactome conserves general function over specific form. Xin X, et al. Mol Syst Biol, 2013. PMID 23549480, Free PMC Article
  5. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in ciliary transition zone IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Verprolin
NP_741687.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    19127525..19131014
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_171597.3 → NP_741687.1  Verprolin [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_741687.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9NET8
Nucleotide Protein
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