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Y44A6D.3 Brinker DNA-binding domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 189900, updated on 2-Nov-2024

Summary

Official Symbol
Y44A6D.3
Official Full Name
Brinker DNA-binding domain-containing protein
Primary source
WormBase:WBGene00012854
Locus tag
CELE_Y44A6D.3
See related
AllianceGenome:WB:WBGene00012854
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable DNA binding activity. Is expressed in body wall musculature. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See Y44A6D.3 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (20790768..20792421, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Hypoxia-inducible factor 1;PAS domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene Antitoxin Neighboring gene Protein sdf-9 Neighboring gene Branched-chain-amino-acid aminotransferase Neighboring gene Transmembrane protein

General protein information

Preferred Names
Brinker DNA-binding domain-containing protein
NP_001256953.1
  • Confirmed by transcript evidence
NP_001256954.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    20790768..20792421 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001270024.4NP_001256953.1  Brinker DNA-binding domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256953.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XXE0
    Conserved Domains (1) summary
    pfam09607
    Location:2162
    BrkDBD; Brinker DNA-binding domain
  2. NM_001270025.3NP_001256954.1  Brinker DNA-binding domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256954.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F3Y5Q0
    Conserved Domains (1) summary
    pfam09607
    Location:2263
    BrkDBD; Brinker DNA-binding domain