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Y47H9C.9 Zinc finger PHD-type domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 190000, updated on 18-Sep-2024

Summary

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Official Symbol
Y47H9C.9
Official Full Name
Zinc finger PHD-type domain-containing protein
Primary source
WormBase:WBGene00012952
Locus tag
CELE_Y47H9C.9
See related
AllianceGenome:WB:WBGene00012952
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See Y47H9C.9 in Genome Data Viewer
Location:
chromosome: I
Exon count:
4
Sequence:
Chromosome: I; NC_003279.8 (11898789..11901476, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene NACHT_N domain-containing protein Neighboring gene Mos1 transposase HTH domain-containing protein Neighboring gene pseudo Neighboring gene F-box domain-containing protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Zinc finger PHD-type domain-containing protein
NP_493018.2
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    11898789..11901476 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_060617.2 → NP_493018.2  Zinc finger PHD-type domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_493018.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XWD9
    Conserved Domains (2) summary
    PRK10698
    Location:13 → 172
    PRK10698; phage shock protein PspA; Provisional
    pfam06918
    Location:152 → 367
    DUF1280; Protein of unknown function (DUF1280)
Nucleotide Protein
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