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Y53F4B.1 Protein kinase domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 190206, updated on 2-Nov-2024

Summary

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Official Symbol
Y53F4B.1
Official Full Name
Protein kinase domain-containing protein
Primary source
WormBase:WBGene00013149
Locus tag
CELE_Y53F4B.1
See related
AllianceGenome:WB:WBGene00013149
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable ATP binding activity and protein kinase activity. Predicted to be involved in necroptotic signaling pathway. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Y53F4B.1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
11
Sequence:
Chromosome: II; NC_003280.10 (14953852..14958213, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Phosphodiesterase;putative 3',5'-cyclic phosphodiesterase pde-3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Elongation of very long chain fatty acids protein Neighboring gene Transcription factor CBF/NF-Y/archaeal histone domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
NOT enables protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in necroptotic signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
  
involved_in response to stimulus IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Protein kinase domain-containing protein
NP_497085.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    14953852..14958213 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_064684.4 → NP_497085.2  Protein kinase domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_497085.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9NAC7
    Conserved Domains (1) summary
    cd00180
    Location:29 → 303
    PKc; Catalytic domain of Protein Kinases
Nucleotide Protein
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Gene LinkOut

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