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Y54E2A.9 Vitelline membrane outer layer protein 1 homolog [ Caenorhabditis elegans ]

Gene ID: 190258, updated on 2-Nov-2024

Summary

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Official Symbol
Y54E2A.9
Official Full Name
Vitelline membrane outer layer protein 1 homolog
Primary source
WormBase:WBGene00013194
Locus tag
CELE_Y54E2A.9
See related
AllianceGenome:WB:WBGene00013194
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in extracellular space. Orthologous to human VMO1 (vitelline membrane outer layer 1 homolog). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Y54E2A.9 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003280.10 (14785184..14786006, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Activating signal cointegrator 1 complex subunit 3;SEC63 domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene Bromodomain associated domain-containing protein;Coiled-coil domain-containing protein 137 Neighboring gene ncRNA Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Vitelline membrane outer layer protein 1 homolog
NP_497065.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    14785184..14786006 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_064664.3 → NP_497065.1  Vitelline membrane outer layer protein 1 homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_497065.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XWI4
    Conserved Domains (2) summary
    cd00220
    Location:20 → 197
    VMO-I; Vitelline membrane outer layer protein I (VMO-I) domain, VMO-I is one of the proteins found in the outer layer of the vitelline membrane of poultry eggs; VMO-I, lysozyme, and VMO-II are tightly bound to ovomucin; this complex forms the backbone of the ...
    pfam03762
    Location:22 → 196
    VOMI; Vitelline membrane outer layer protein I (VOMI)
Nucleotide Protein
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