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Y58A7A.1 Copper transport protein [ Caenorhabditis elegans ]

Gene ID: 190381, updated on 2-Nov-2024

Summary

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Official Symbol
Y58A7A.1
Official Full Name
Copper transport protein
Primary source
WormBase:WBGene00021975
Locus tag
CELE_Y58A7A.1
See related
AllianceGenome:WB:WBGene00021975
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable copper ion transmembrane transporter activity. Predicted to be involved in copper ion transmembrane transport. Predicted to be located in membrane. Orthologous to human SLC31A1 (solute carrier family 31 member 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Y58A7A.1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (5067637..5069540, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Mitogen-activated protein kinase kinase kinase mlk-1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Venom peptide Neighboring gene IBR domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables copper ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in copper ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in copper ion transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Copper transport protein
NP_001256056.1
  • Confirmed by transcript evidence
NP_001256057.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    5067637..5069540 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001269127.5 → NP_001256056.1  Copper transport protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256056.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D6RYD3
    Conserved Domains (1) summary
    pfam04145
    Location:34 → 147
    Ctr; Ctr copper transporter family

  2. NM_001269128.3 → NP_001256057.1  Copper transport protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256057.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q966A8
    Conserved Domains (1) summary
    pfam04145
    Location:1 → 114
    Ctr; Ctr copper transporter family
Nucleotide Protein
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