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thn-5 Pathogenesis-related protein 5-like [ Caenorhabditis elegans ]

Gene ID: 190420, updated on 2-Nov-2024

Summary

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Official Symbol
thn-5
Official Full Name
Pathogenesis-related protein 5-like
Primary source
WormBase:WBGene00021999
Locus tag
CELE_Y59E9AR.4
See related
AllianceGenome:WB:WBGene00021999
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See thn-5 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
3
Sequence:
Chromosome: IV; NC_003282.8 (5230830..5232649)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene THaumatiN family Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Putative T-box protein 30/42 Neighboring gene Putative T-box protein 30/42

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
Pathogenesis-related protein 5-like
NP_500748.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    5230830..5232649
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_068347.3 → NP_500748.2  Pathogenesis-related protein 5-like [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_500748.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9N326
    Conserved Domains (1) summary
    cd09218
    Location:21 → 232
    TLP-PA; allergenic/antifungal thaumatin-like proteins: plant and animal homologs
Nucleotide Protein
Heading Accession and Version

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