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dmd-9 DM domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 190512, updated on 2-Nov-2024

Summary

Official Symbol
dmd-9
Official Full Name
DM domain-containing protein
Primary source
WormBase:WBGene00022060
Locus tag
CELE_Y67D8A.3
See related
AllianceGenome:WB:WBGene00022060
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II and sex differentiation. Predicted to be active in nucleus. Is expressed in several structures, including BAG; amphid neurons; somatic nervous system; sperm; and tail. Orthologous to human DMRTB1 (DMRT like family B with proline rich C-terminal 1); DMRTC1 (DMRT like family C1); and DMRTC1B (DMRT like family C1B). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See dmd-9 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
4
Sequence:
Chromosome: IV; NC_003282.8 (3253261..3254543, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Phosphorylase b kinase regulatory subunit Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in sex differentiation IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
DM domain-containing protein
NP_500305.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    3253261..3254543 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_067904.4NP_500305.1  DM domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_500305.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95XU1
    Conserved Domains (1) summary
    smart00301
    Location:2779
    DM; Doublesex DNA-binding motif