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grd-16 Ground-like domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 190533, updated on 2-Nov-2024

Summary

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Official Symbol
grd-16
Official Full Name
Ground-like domain-containing protein
Primary source
WormBase:WBGene00001705
Locus tag
CELE_Y69A2AL.1
See related
AllianceGenome:WB:WBGene00001705
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in hypodermis; intestine; and nervous system. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See grd-16 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
6
Sequence:
Chromosome: IV; NC_003282.8 (2476686..2480316)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Invertebrate-type lysozyme 2 Neighboring gene lysozyme Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Phospholipase A2 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comprehensive analysis of gene expression patterns of hedgehog-related genes. Hao L, et al. BMC Genomics, 2006 Oct 31. PMID 17076889, Free PMC Article
  2. Evolution of hedgehog and hedgehog-related genes, their origin from Hog proteins in ancestral eukaryotes and discovery of a novel Hint motif. Bürglin TR. BMC Genomics, 2008 Mar 11. PMID 18334026, Free PMC Article
  3. The C. elegans regulatory factor X (RFX) DAF-19M module: A shift from general ciliogenesis to cell-specific ciliary and behavioral specialization. Ahn S, et al. Cell Rep, 2022 Apr 12. PMID 35417689
  4. Meta-Analysis of Caenorhabditis elegans Transcriptomics Implicates Hedgehog-Like Signaling in Host-Microbe Interactions. Zárate-Potes A, et al. Front Microbiol, 2022. PMID 35620104, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
Ground-like domain-containing protein
NP_500209.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    2476686..2480316
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_067808.4 → NP_500209.2  Ground-like domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_500209.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9N2Z2
    Conserved Domains (1) summary
    pfam04155
    Location:276 → 347
    Ground-like; Ground-like domain
Nucleotide Protein
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