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Y69H2.10 TIL domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 190560, updated on 2-Nov-2024

Summary

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Official Symbol
Y69H2.10
Official Full Name
TIL domain-containing protein
Primary source
WormBase:WBGene00013485
Locus tag
CELE_Y69H2.10
See related
AllianceGenome:WB:WBGene00013485
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Y69H2.10 in Genome Data Viewer
Location:
chromosome: V
Exon count:
15
Sequence:
Chromosome: V; NC_003283.11 (18670317..18684378)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene EGF-like domain-containing protein Neighboring gene ncRNA Neighboring gene Follistatin-like domain-containing protein;TIL domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene CUB domain-containing protein Neighboring gene UBC core domain-containing protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
  2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables serine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
TIL domain-containing protein
NP_001024279.1
  • Confirmed by transcript evidence
NP_001263929.1
  • Confirmed by transcript evidence
NP_001370874.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    18670317..18684378
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001277000.3 → NP_001263929.1  TIL domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001263929.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    L8E6Z8
    Conserved Domains (1) summary
    pfam01826
    Location:162 → 214
    TIL; Trypsin Inhibitor like cysteine rich domain

  2. NM_001029108.4 → NP_001024279.1  TIL domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001024279.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9U1U0
    Conserved Domains (1) summary
    pfam01826
    Location:386 → 438
    TIL; Trypsin Inhibitor like cysteine rich domain

  3. NM_001383489.1 → NP_001370874.1  TIL domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L2K9
    Conserved Domains (1) summary
    pfam01826
    Location:172 → 227
    TIL; Trypsin Inhibitor like cysteine rich domain

RNA

  1. NR_070184.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
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