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Ppy pancreatic polypeptide [ Mus musculus (house mouse) ]

Gene ID: 19064, updated on 2-Nov-2024

Summary

Official Symbol
Ppyprovided by MGI
Official Full Name
pancreatic polypeptideprovided by MGI
Primary source
MGI:MGI:97753
See related
Ensembl:ENSMUSG00000017316 AllianceGenome:MGI:97753
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
PP; IGSPP
Summary
Enables G protein-coupled receptor binding activity. Predicted to be involved in feeding behavior and neuropeptide signaling pathway. Located in cytoplasm and extracellular space. Is expressed in several structures, including gut. Orthologous to human PPY (pancreatic polypeptide). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in colon adult (RPKM 58.6) and genital fat pad adult (RPKM 18.9) See more
Orthologs
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Genomic context

See Ppy in Genome Data Viewer
Location:
11 D; 11 65.48 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (101990757..101992145, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (102099931..102101319, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene CD300 molecule like family member G Neighboring gene predicted gene, 39393 Neighboring gene membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) Neighboring gene peptide YY Neighboring gene ribosomal protein S2 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Clone Names

  • MGC123521

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor binding IDA
Inferred from Direct Assay
more info
PubMed 
enables hormone activity IEA
Inferred from Electronic Annotation
more info
 
enables neuropeptide Y receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables neuropeptide hormone activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in feeding behavior IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in neuropeptide signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
pancreatic polypeptide prohormone
Names
pancreatic prohormone

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008918.2NP_032944.1  pancreatic polypeptide prohormone precursor

    See identical proteins and their annotated locations for NP_032944.1

    Status: VALIDATED

    Source sequence(s)
    AK131852
    Consensus CDS
    CCDS25486.1
    UniProtKB/Swiss-Prot
    P10601
    UniProtKB/TrEMBL
    Q3UW05, Q496X5
    Related
    ENSMUSP00000017460.6, ENSMUST00000017460.6
    Conserved Domains (1) summary
    pfam00159
    Location:3165
    Hormone_3; Pancreatic hormone peptide

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    101990757..101992145 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)