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Y97E10AL.1 Protein stum homolog [ Caenorhabditis elegans ]

Gene ID: 190813, updated on 2-Nov-2024

Summary

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Official Symbol
Y97E10AL.1
Official Full Name
Protein stum homolog
Primary source
WormBase:WBGene00022392
Locus tag
CELE_Y97E10AL.1
See related
AllianceGenome:WB:WBGene00022392
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in proprioception; sensory perception of mechanical stimulus; and taxis. Predicted to be located in membrane. Predicted to be active in sensory dendrite. Orthologous to human STUM (stum, mechanosensory transduction mediator homolog). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Y97E10AL.1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
5
Sequence:
Chromosome: V; NC_003283.11 (7986160..7988336)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Serine aminopeptidase S33 domain-containing protein Neighboring gene ncRNA Neighboring gene Homeobox domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in proprioception IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in sensory perception of mechanical stimulus IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in taxis IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in sensory dendrite IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Protein stum homolog
NP_505055.4
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    7986160..7988336
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_072654.7 → NP_505055.4  Protein stum homolog [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q965S1
    Conserved Domains (1) summary
    pfam15795
    Location:89 → 174
    Spec3; Ectodermal ciliogenesis protein
Nucleotide Protein
Heading Accession and Version

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