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sre-20 Serpentine Receptor, class E (Epsilon) [ Caenorhabditis elegans ]

Gene ID: 191175, updated on 2-Nov-2024

Summary

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Official Symbol
sre-20
Official Full Name
Serpentine Receptor, class E (Epsilon)
Primary source
WormBase:WBGene00013907
Locus tag
CELE_ZC455.7
See related
AllianceGenome:WB:WBGene00013907
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See sre-20 in Genome Data Viewer
Location:
chromosome: V
Exon count:
7
Sequence:
Chromosome: V; NC_003283.11 (12783041..12784961, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene DH domain-containing protein;LIM domain protein;RING-type domain-containing protein;UDENN domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA-Ser Neighboring gene peptidylprolyl isomerase Neighboring gene Serpentine Receptor, class BC (Class B-like)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in sensory perception of chemical stimulus IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine Receptor, class E (Epsilon)
NP_001256459.1
  • Confirmed by transcript evidence
NP_001369961.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    12783041..12784961 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001383429.1 → NP_001369961.1  Serpentine Receptor, class E (Epsilon) [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q23337
    Conserved Domains (1) summary
    pfam03125
    Location:2 → 301
    Sre; C. elegans Sre G protein-coupled chemoreceptor

  2. NM_001269530.1 → NP_001256459.1  Serpentine Receptor, class E (Epsilon) [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256459.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G3MU24
    Conserved Domains (1) summary
    pfam03125
    Location:24 → 323
    Sre; C. elegans Sre G protein-coupled chemoreceptor
Nucleotide Protein
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