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his-39 Histone H2A/H2B/H3 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 191681, updated on 2-Nov-2024

Summary

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Official Symbol
his-39
Official Full Name
Histone H2A/H2B/H3 domain-containing protein
Primary source
WormBase:WBGene00001913
Locus tag
CELE_F45F2.2
See related
AllianceGenome:WB:WBGene00001913
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be part of nucleosome. Orthologous to human H2BK1 (H2B.K variant histone 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See his-39 in Genome Data Viewer
Location:
chromosome: V
Exon count:
1
Sequence:
Chromosome: V; NC_003283.11 (8536513..8536716)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Histone H3 Neighboring gene Histone H4 Neighboring gene OToPetrin-Like Neighboring gene Major facilitator superfamily (MFS) profile domain-containing protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Nicotinic acetylcholine receptors in the nematode Caenorhabditis elegans. Ballivet M, et al. J Mol Biol, 1996 May 3. PMID 8627624
  2. A modular network model of aging. Xue H, et al. Mol Syst Biol, 2007. PMID 18059442, Free PMC Article
  3. The Caenorhabditis elegans histone hairpin-binding protein is required for core histone gene expression and is essential for embryonic and postembryonic cell division. Pettitt J, et al. J Cell Sci, 2002 Feb 15. PMID 11865041
  4. Caenorhabditis elegans ALG-1 antimorphic mutations uncover functions for Argonaute in microRNA guide strand selection and passenger strand disposal. Zinovyeva AY, et al. Proc Natl Acad Sci U S A, 2015 Sep 22. PMID 26351692, Free PMC Article
  5. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Histone H2A/H2B/H3 domain-containing protein
NP_505201.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    8536513..8536716
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_072800.5 → NP_505201.3  Histone H2A/H2B/H3 domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q22979
    Conserved Domains (1) summary
    cl23830
    Location:1 → 66
    H2B; Histone H2B
Nucleotide Protein
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