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srd-1 Serpentine receptor class delta-1 [ Caenorhabditis elegans ]

Gene ID: 191794, updated on 2-Nov-2024

Summary

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Official Symbol
srd-1
Official Full Name
Serpentine receptor class delta-1
Primary source
WormBase:WBGene00005079
Locus tag
CELE_F33H1.5
See related
AllianceGenome:WB:WBGene00005079
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Is expressed in amphid neurons; ray structural cell; and in male. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See srd-1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
9
Sequence:
Chromosome: II; NC_003280.10 (10180199..10182734, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Ww (WW) domain Binding Protein Neighboring gene C2H2-type domain-containing protein Neighboring gene ncRNA Neighboring gene Serpentine receptor class delta-2 Neighboring gene M-phase inducer phosphatase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SRD-1 in AWA neurons is the receptor for female volatile sex pheromones in C. elegans males. Wan X, et al. EMBO Rep, 2019 Mar. PMID 30792215, Free PMC Article
  2. unc-3, a gene required for axonal guidance in Caenorhabditis elegans, encodes a member of the O/E family of transcription factors. Prasad BC, et al. Development, 1998 Apr. PMID 9502737
  3. Sensory experience and sensory activity regulate chemosensory receptor gene expression in Caenorhabditis elegans. Peckol EL, et al. Proc Natl Acad Sci U S A, 2001 Sep 25. PMID 11572964, Free PMC Article
  4. Interplay of neuronal and non-neuronal genes regulates intestinal DAF-16-mediated immune response during Fusarium infection of Caenorhabditis elegans. Nag P, et al. Cell Death Discov, 2017. PMID 29152379, Free PMC Article
  5. Odorant receptor localization to olfactory cilia is mediated by ODR-4, a novel membrane-associated protein. Dwyer ND, et al. Cell, 1998 May 1. PMID 9590179

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine receptor class delta-1
NP_496195.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    10180199..10182734 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063794.1 → NP_496195.1  Serpentine receptor class delta-1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496195.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q19992
    Conserved Domains (1) summary
    pfam10317
    Location:34 → 324
    7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q19992.1

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