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srd-4 G protein-coupled receptor [ Caenorhabditis elegans ]

Gene ID: 191796, updated on 2-Nov-2024

Summary

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Official Symbol
srd-4
Official Full Name
G protein-coupled receptor
Primary source
WormBase:WBGene00005082
Locus tag
CELE_ZK863.5
See related
AllianceGenome:WB:WBGene00005082
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Is expressed in BAGL; BAGR; motor neurons; and tail neurons. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See srd-4 in Genome Data Viewer
Location:
chromosome: V
Exon count:
3
Sequence:
Chromosome: V; NC_003283.11 (12184949..12186352)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Elongator complex protein 3 Neighboring gene U6 snRNA-specific terminal uridylyltransferase Neighboring gene UPAR/Ly6 domain-containing protein Neighboring gene ncRNA Neighboring gene Dosage compensation protein dpy-30

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome profiling of the C. elegans Rb ortholog reveals diverse developmental roles. Kirienko NV, et al. Dev Biol, 2007 May 15. PMID 17368442, Free PMC Article
  2. G protein-coupled receptor-based thermosensation determines temperature acclimatization of Caenorhabditis elegans. Ohnishi K, et al. Nat Commun, 2024 Feb 23. PMID 38396085, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
G protein-coupled receptor
NP_506057.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    12184949..12186352
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_073656.2 → NP_506057.1  G protein-coupled receptor [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_506057.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q23648
    Conserved Domains (1) summary
    pfam10317
    Location:8 → 294
    7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd
Nucleotide Protein
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