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srh-5 Serpentine Receptor, class H [ Caenorhabditis elegans ]

Gene ID: 191842, updated on 2-Nov-2024

Summary

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Official Symbol
srh-5
Official Full Name
Serpentine Receptor, class H
Primary source
WormBase:WBGene00005231
Locus tag
CELE_K04F1.16
See related
AllianceGenome:WB:WBGene00005231
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Is expressed in ADLL; ADLR; ASHL; and ASHR. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See srh-5 in Genome Data Viewer
Location:
chromosome: V
Exon count:
5
Sequence:
Chromosome: V; NC_003283.11 (1685628..1686864)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene Serpentine Receptor, class H Neighboring gene pseudo Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine Receptor, class H
NP_503482.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    1685628..1686864
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071081.1 → NP_503482.1  Serpentine Receptor, class H [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503482.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9TXK5
    Conserved Domains (1) summary
    pfam10318
    Location:9 → 313
    7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh
Nucleotide Protein
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