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srh-39 Serpentine Receptor, class H [ Caenorhabditis elegans ]

Gene ID: 191858, updated on 2-Nov-2024

Summary

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Official Symbol
srh-39
Official Full Name
Serpentine Receptor, class H
Primary source
WormBase:WBGene00005262
Locus tag
CELE_C06A8.7
See related
AllianceGenome:WB:WBGene00005262
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See srh-39 in Genome Data Viewer
Location:
chromosome: II
Exon count:
6
Sequence:
Chromosome: II; NC_003280.10 (7763763..7765556, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene Centrosomal protein CEP104 N-terminal domain-containing protein;DUF2040 domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene U2A'/phosphoprotein 32 family A C-terminal domain-containing protein Neighboring gene putative methylenetetrahydrofolate reductase (NADPH)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The large srh family of chemoreceptor genes in Caenorhabditis nematodes reveals processes of genome evolution involving large duplications and deletions and intron gains and losses. Robertson HM. Genome Res, 2000 Feb. PMID 10673277
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine Receptor, class H
NP_495632.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    7763763..7765556 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063231.2 → NP_495632.1  Serpentine Receptor, class H [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495632.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q17690
    Conserved Domains (1) summary
    pfam10318
    Location:11 → 308
    7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh
Nucleotide Protein
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