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srj-9 Serpentine Receptor, class J [ Caenorhabditis elegans ]

Gene ID: 191934, updated on 2-Nov-2024

Summary

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Official Symbol
srj-9
Official Full Name
Serpentine Receptor, class J
Primary source
WormBase:WBGene00005597
Locus tag
CELE_T20C4.1
See related
AllianceGenome:WB:WBGene00005597
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See srj-9 in Genome Data Viewer
Location:
chromosome: V
Exon count:
7
Sequence:
Chromosome: V; NC_003283.11 (3431940..3433751)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class AB (Class A-like) Neighboring gene DUF19 domain-containing protein;Secreted protein Neighboring gene Frizzled-2 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine Receptor, class J
NP_001309651.1
  • Confirmed by transcript evidence
NP_001309652.1
  • Confirmed by transcript evidence
NP_001309653.1
  • Confirmed by transcript evidence
NP_503963.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    3431940..3433751
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071562.2 → NP_503963.1  Serpentine Receptor, class J [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503963.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9UAW7
    Conserved Domains (1) summary
    pfam10319
    Location:2 → 313
    7TM_GPCR_Srj; Serpentine type 7TM GPCR chemoreceptor Srj

  2. NM_001322515.1 → NP_001309651.1  Serpentine Receptor, class J [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A131MD33
    Conserved Domains (1) summary
    cl22924
    Location:2 → 188
    7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd

  3. NM_001322516.1 → NP_001309653.1  Serpentine Receptor, class J [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A131MB81
    Conserved Domains (1) summary
    cl22924
    Location:1 → 221
    7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd

  4. NM_001322517.1 → NP_001309652.1  Serpentine Receptor, class J [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A131MBS1
    Conserved Domains (1) summary
    cl22924
    Location:1 → 96
    7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd
Nucleotide Protein
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