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str-1 Seven TM Receptor [ Caenorhabditis elegans ]

Gene ID: 191967, updated on 2-Nov-2024

Summary

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Official Symbol
str-1
Official Full Name
Seven TM Receptor
Primary source
WormBase:WBGene00006069
Locus tag
CELE_C42D4.5
See related
AllianceGenome:WB:WBGene00006069
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable G protein-coupled olfactory receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and olfactory behavior. Located in non-motile cilium. Is expressed in AWBL and AWBR. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See str-1 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
5
Sequence:
Chromosome: IV; NC_003282.8 (7173789..7175008)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene Seven TM Receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Automated high-throughput cell microsurgery on-chip. Chung K, et al. Lab Chip, 2009 Oct 7. PMID 19967110
  2. A trade-off switch of two immunological memories in Caenorhabditis elegans reinfected by bacterial pathogens. Yan J, et al. J Biol Chem, 2020 Dec 11. PMID 33051209, Free PMC Article
  3. Reprogramming chemotaxis responses: sensory neurons define olfactory preferences in C. elegans. Troemel ER, et al. Cell, 1997 Oct 17. PMID 9346234
  4. Cell-type specific regulation of serotonergic identity by the C. elegans LIM-homeodomain factor LIM-4. Zheng X, et al. Dev Biol, 2005 Oct 15. PMID 16168406
  5. Alternative olfactory neuron fates are specified by the LIM homeobox gene lim-4. Sagasti A, et al. Genes Dev, 1999 Jul 15. PMID 10421632, Free PMC Article

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables G protein-coupled olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in detection of chemical stimulus involved in sensory perception of smell IEA
Inferred from Electronic Annotation
more info
  
involved_in olfactory behavior IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in cilium IDA
Inferred from Direct Assay
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in non-motile cilium IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Seven TM Receptor
NP_501130.2
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    7173789..7175008
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_068729.2 → NP_501130.2  Seven TM Receptor [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_501130.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q18570
    Conserved Domains (1) summary
    pfam10326
    Location:9 → 312
    7TM_GPCR_Str; Serpentine type 7TM GPCR chemoreceptor Str
Nucleotide Protein
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