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str-227 Seven TM Receptor [ Caenorhabditis elegans ]

Gene ID: 192037, updated on 2-Nov-2024

Summary

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Official Symbol
str-227
Official Full Name
Seven TM Receptor
Primary source
WormBase:WBGene00006258
Locus tag
CELE_C07G3.3
See related
AllianceGenome:WB:WBGene00006258
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable G protein-coupled olfactory receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and olfactory behavior. Predicted to be located in membrane. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See str-227 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (3518189..3519801)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Seven TM Receptor Neighboring gene ncRNA Neighboring gene Seven TM Receptor Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene NADAR domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. G protein-coupled receptor-based thermosensation determines temperature acclimatization of Caenorhabditis elegans. Ohnishi K, et al. Nat Commun, 2024 Feb 23. PMID 38396085, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables G protein-coupled olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in detection of chemical stimulus involved in sensory perception of smell IEA
Inferred from Electronic Annotation
more info
  
involved_in olfactory behavior IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Seven TM Receptor
NP_001309620.1
  • Partially confirmed by transcript evidence
NP_503982.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    3518189..3519801
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071581.1 → NP_503982.1  Seven TM Receptor [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503982.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O16326
    Conserved Domains (1) summary
    pfam10326
    Location:10 → 318
    7TM_GPCR_Str; Serpentine type 7TM GPCR chemoreceptor Str

  2. NM_001322527.1 → NP_001309620.1  Seven TM Receptor [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A131MBL4
    Conserved Domains (1) summary
    pfam10326
    Location:1 → 213
    7TM_GPCR_Str; Serpentine type 7TM GPCR chemoreceptor Str
Nucleotide Protein
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