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zig-6 Zwei Ig domain protein zig-6 [ Caenorhabditis elegans ]

Gene ID: 192089, updated on 2-Nov-2024

Summary

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Official Symbol
zig-6
Official Full Name
Zwei Ig domain protein zig-6
Primary source
WormBase:WBGene00006983
Locus tag
CELE_T03G11.8
See related
AllianceGenome:WB:WBGene00006983
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Involved in homeostatic process. Predicted to be located in membrane. Predicted to be active in neuron projection membrane. Is expressed in body wall musculature; enteric muscle; head neurons; and vulval muscle. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See zig-6 in Genome Data Viewer
Location:
chromosome: X
Exon count:
6
Sequence:
Chromosome: X; NC_003284.9 (5186916..5189077, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene MARVEL domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Immunoglobulin-domain proteins required for maintenance of ventral nerve cord organization. Aurelio O, et al. Science, 2002 Jan 25. PMID 11809975
  2. The small, secreted immunoglobulin protein ZIG-3 maintains axon position in Caenorhabditis elegans. Bénard C, et al. Genetics, 2009 Nov. PMID 19737747, Free PMC Article
  3. The immunoglobulin superfamily in Caenorhabditis elegans and Drosophila melanogaster. Hobert O, et al. Development, 2004 May. PMID 15128663
  4. The twisted pharynx phenotype in C. elegans. Axäng C, et al. BMC Dev Biol, 2007 Jun 1. PMID 17540043, Free PMC Article
  5. Immunoglobulin superfamily proteins in Caenorhabditis elegans. Teichmann SA, et al. J Mol Biol, 2000 Mar 10. PMID 10698639

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in homeostatic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in synapse organization IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  
located_in membrane ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
is_active_in neuron projection membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Zwei Ig domain protein zig-6
NP_508882.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    5186916..5189077 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_076481.8 → NP_508882.3  Zwei Ig domain protein zig-6 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_508882.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q22125
    Conserved Domains (3) summary
    smart00410
    Location:34 → 119
    IG_like; Immunoglobulin like
    pfam00047
    Location:140 → 213
    ig; Immunoglobulin domain
    cl11960
    Location:45 → 109
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q22125.2

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