U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CONPUDRAFT_99408 succinate dehydrogenase cytochrome b560 subunit [ Coniophora puteana RWD-64-598 SS2 ]

Gene ID: 19211933, updated on 26-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
CONPUDRAFT_99408
Gene description
succinate dehydrogenase cytochrome b560 subunit
Locus tag
CONPUDRAFT_99408
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Coniophora puteana RWD-64-598 SS2 (strain: RWD-64-598 SS2)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Boletales; Coniophorineae; Coniophoraceae; Coniophora
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CONPUDRAFT_99408 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_006913055.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Acetamidase Formamidase Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006913055.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial electron transport, succinate to ubiquinone IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
succinate dehydrogenase cytochrome b560 subunit

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006913055.1 Reference assembly

    Range
    804853..805787 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007767507.1 → XP_007765697.1  succinate dehydrogenase cytochrome b560 subunit [Coniophora puteana RWD-64-598 SS2]

    See identical proteins and their annotated locations for XP_007765697.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5M3MXB4
    Conserved Domains (1) summary
    cd03499
    Location:60 → 176
    SQR_TypeC_SdhC; Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase C (SdhC) subunit; composed of bacterial SdhC and eukaryotic large cytochrome b binding (CybL) proteins. SQR catalyzes the oxidation of succinate to fumarate coupled to the ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases