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Ptger1 prostaglandin E receptor 1 (subtype EP1) [ Mus musculus (house mouse) ]

Gene ID: 19216, updated on 2-Nov-2024

Summary

Official Symbol
Ptger1provided by MGI
Official Full Name
prostaglandin E receptor 1 (subtype EP1)provided by MGI
Primary source
MGI:MGI:97793
See related
Ensembl:ENSMUSG00000019464 AllianceGenome:MGI:97793
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EP1; Ptgerep1
Summary
Enables D1 dopamine receptor binding activity. Involved in adenylate cyclase-activating dopamine receptor signaling pathway. Acts upstream of or within response to lipopolysaccharide. Predicted to be active in plasma membrane. Is expressed in several structures, including alimentary system; brain; genitourinary system; immune system; and integumental system. Orthologous to human PTGER1 (prostaglandin E receptor 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in thymus adult (RPKM 44.9), spleen adult (RPKM 41.4) and 28 other tissues See more
Orthologs
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Genomic context

See Ptger1 in Genome Data Viewer
Location:
8 C2; 8 40.22 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (84393171..84399385)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (83666644..83672756)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member B1 Neighboring gene STARR-seq mESC enhancer starr_22093 Neighboring gene STARR-positive B cell enhancer ABC_E1372 Neighboring gene STARR-positive B cell enhancer ABC_E11744 Neighboring gene GIPC PDZ domain containing family, member 1 Neighboring gene protein kinase N1 Neighboring gene STARR-positive B cell enhancer ABC_E9319 Neighboring gene STARR-seq mESC enhancer starr_22095 Neighboring gene STARR-positive B cell enhancer ABC_E562 Neighboring gene DEAD box helicase 39a Neighboring gene microRNA 1668 Neighboring gene adhesion G protein-coupled receptor E5 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:86260655-86260859 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:86263836-86264037 Neighboring gene predicted gene, 46046

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Targeted (6)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables D1 dopamine receptor binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables prostaglandin E receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables prostaglandin E receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables prostaglandin E receptor activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
prostaglandin E2 receptor EP1 subtype
Names
PGE receptor EP1 subtype
PGE2 receptor EP1 subtype
prostanoid EP1 receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_013641.3NP_038669.1  prostaglandin E2 receptor EP1 subtype

    See identical proteins and their annotated locations for NP_038669.1

    Status: VALIDATED

    Source sequence(s)
    AC164432, AK053616, AK164746
    Consensus CDS
    CCDS22458.1
    UniProtKB/Swiss-Prot
    P35375
    UniProtKB/TrEMBL
    B2RS62
    Related
    ENSMUSP00000019608.6, ENSMUST00000019608.7
    Conserved Domains (1) summary
    pfam00001
    Location:302354
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    84393171..84399385
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006530771.5XP_006530834.1  prostaglandin E2 receptor EP1 subtype isoform X1

    Conserved Domains (2) summary
    cd14964
    Location:7096
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:69394
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily