U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Prok2 prokineticin 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 192206, updated on 2-Nov-2024

Summary

Official Symbol
Prok2provided by RGD
Official Full Name
prokineticin 2provided by RGD
Primary source
RGD:620280
See related
EnsemblRapid:ENSRNOG00000010898 AllianceGenome:RGD:620280
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Bv8; PK2
Summary
Enables G protein-coupled receptor binding activity. Predicted to be involved in several processes, including angiogenesis; endothelial cell proliferation; and positive regulation of smooth muscle contraction. Predicted to act upstream of or within circadian rhythm. Predicted to be located in extracellular region. Human ortholog(s) of this gene implicated in hypogonadotropic hypogonadism 4 with or without anosmia. Orthologous to human PROK2 (prokineticin 2). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Testes (RPKM 59.2), Spleen (RPKM 8.6) and 1 other tissue See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Prok2 in Genome Data Viewer
Location:
4q34
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (133903210..133918126, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (132346681..132361754, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (132157556..132171244, complement)

Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 27 Neighboring gene immediate early response 3 interacting protein 1, pseudogene 1 Neighboring gene uncharacterized LOC120102349 Neighboring gene macrophage migration inhibitory factor-like

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables G protein-coupled receptor binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in angiogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in chemotaxis ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within circadian rhythm ISO
Inferred from Sequence Orthology
more info
 
involved_in endothelial cell proliferation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in endothelial cell proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
involved_in neuropeptide signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of smooth muscle contraction ISO
Inferred from Sequence Orthology
more info
 
involved_in spermatogenesis ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
prokineticin-2
Names
homolog of mouse Bv8 (Bombina variegata 8 kDa)
homolog of mouse Bv8 (Bombina variegata 8 kDa); prokineticin 2
prokineticin 2 beta

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001037541.3NP_001032630.1  prokineticin-2 isoform 1 precursor

    See identical proteins and their annotated locations for NP_001032630.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000004
    UniProtKB/TrEMBL
    A6IBH4, F7EWJ2, Q6V8J7
    Related
    ENSRNOP00000015058.1, ENSRNOT00000015058.6
    Conserved Domains (1) summary
    pfam06607
    Location:23125
    Prokineticin
  2. NM_138852.3NP_620207.1  prokineticin-2 isoform 2 precursor

    See identical proteins and their annotated locations for NP_620207.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000004
    UniProtKB/Swiss-Prot
    Q8R413
    UniProtKB/TrEMBL
    A6IBH3
    Related
    ENSRNOP00000015075.1, ENSRNOT00000015075.4
    Conserved Domains (1) summary
    pfam06607
    Location:23104
    Prokineticin

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086022.1 Reference GRCr8

    Range
    133903210..133918126 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039106990.2XP_038962918.1  prokineticin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8I6AGP5
    Related
    ENSRNOP00000092204.1, ENSRNOT00000111899.2
    Conserved Domains (1) summary
    pfam06607
    Location:23105
    Prokineticin
  2. XM_063285462.1XP_063141532.1  prokineticin-2 isoform X2