U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Oog1 oogenesin 1 [ Mus musculus (house mouse) ]

Gene ID: 193322, updated on 2-Nov-2024

Summary

Official Symbol
Oog1provided by MGI
Official Full Name
oogenesin 1provided by MGI
Primary source
MGI:MGI:2679150
See related
Ensembl:ENSMUSG00000096576 AllianceGenome:MGI:2679150
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Oog; c-1
Summary
Predicted to enable ubiquitin-like ligase-substrate adaptor activity. Acts upstream of or within oocyte development. Located in cytoplasm and nucleus. Is expressed in blastocyst; early embryo; and ovary. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward ovary adult (RPKM 1.4) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Oog1 in Genome Data Viewer
Location:
12 D2; 12 41.84 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (87649435..87655615)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (87602665..87608845)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene GLE1 RNA export mediator pseudogene Neighboring gene GLE1 RNA export mediator pseudogene Neighboring gene STARR-seq mESC enhancer starr_32892 Neighboring gene STARR-seq mESC enhancer starr_32893 Neighboring gene eukaryotic translation initiation factor 1A domain containing 6 Neighboring gene STARR-seq mESC enhancer starr_32894 Neighboring gene GLE1 RNA export mediator pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables ubiquitin-like ligase-substrate adaptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
part_of Cul2-RING ubiquitin ligase complex IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_178657.5NP_848772.3  oogenesin-1

    Status: VALIDATED

    Source sequence(s)
    AB050008, AK143386, CF915726, DV647701
    Consensus CDS
    CCDS49123.1
    UniProtKB/Swiss-Prot
    E9Q5G7, Q810D9
    UniProtKB/TrEMBL
    Q3UX09, Q5XG66
    Related
    ENSMUSP00000093165.5, ENSMUST00000095509.6

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    87649435..87655615
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006515619.2XP_006515682.1  oogenesin-1 isoform X1

    UniProtKB/TrEMBL
    Q5XG66