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EIF4EP1 eukaryotic translation initiation factor 4E pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 1980, updated on 17-Jun-2024

Summary

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Official Symbol
EIF4EP1provided by HGNC
Official Full Name
eukaryotic translation initiation factor 4E pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:3292
See related
AllianceGenome:HGNC:3292
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
EIF4EL2; dJ1022P6.3
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Genomic context

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See EIF4EP1 in Genome Data Viewer
Location:
20p12.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (5548852..5549645)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (5589533..5590326)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (5529498..5530291)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1729 Neighboring gene NANOG hESC enhancer GRCh37_chr20:5509506-5510047 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17519 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17520 Neighboring gene ribosomal protein S18 pseudogene 1 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr20:5533770-5534499 Neighboring gene glycerophosphocholine phosphodiesterase 1 Neighboring gene Sharpr-MPRA regulatory region 4324 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12656 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:5590486-5591358 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12657 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:5606161-5606662 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17521 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17522 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17523 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17524 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17525 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17526 Neighboring gene uncharacterized LOC124904864 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:5637190-5637690 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:5637691-5638191 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:5668750-5669250 Neighboring gene Sharpr-MPRA regulatory region 5332 Neighboring gene uncharacterized LOC105372514

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cloning and characterization of human eIF4E genes. Gao M, et al. J Biol Chem, 1998 Feb 20. PMID 9468520
  2. Assignment of two of the translation initiation factor-4E (EIF4EL1 and EIF4EL2) genes to human chromosomes 4 and 20. Pelletier J, et al. Genomics, 1991 Aug. PMID 1916814

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • eukaryotic translation initiation factor 4E-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002658.3 

    Range
    134..927
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    5548852..5549645
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    5589533..5590326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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