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Rnu6-ps1 U6 small nuclear RNA, pseudogene 1 [ Mus musculus (house mouse) ]

Gene ID: 19863, updated on 17-Aug-2024

Summary

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Official Symbol
Rnu6-ps1provided by MGI
Official Full Name
U6 small nuclear RNA, pseudogene 1provided by MGI
Primary source
MGI:MGI:97990
See related
AllianceGenome:MGI:97990
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm24705
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Genomic context

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See Rnu6-ps1 in Genome Data Viewer
Location:
14 C2; 14
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (54818533..54818838)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (54581076..54581381)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene HAUS augmin-like complex, subunit 4 Neighboring gene STARR-seq mESC enhancer starr_36740 Neighboring gene ajuba LIM protein Neighboring gene STARR-seq mESC enhancer starr_36741 Neighboring gene STARR-positive B cell enhancer ABC_E7313 Neighboring gene RIKEN cDNA 4931414P19 gene Neighboring gene STARR-seq mESC enhancer starr_36743 Neighboring gene STARR-positive B cell enhancer ABC_E7314 Neighboring gene proteasome (prosome, macropain) subunit, beta type 5 Neighboring gene microRNA 686

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Nucleotide sequences of mouse genomic loci including a gene or pseudogene for U6 (4.8S) nuclear RNA. Ohshima Y, et al. Nucleic Acids Res, 1981 Oct 10. PMID 6171774, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_001444.4 

    Range
    101..406
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    54818533..54818838
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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