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IT56_gp1 replication-associated protein [ McMurdo Ice Shelf pond-associated circular DNA virus-6 ]

Gene ID: 19893423, updated on 16-Aug-2018

Summary

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Gene symbol
IT56_gp1
Gene description
replication-associated protein
Locus tag
IT56_gp1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
McMurdo Ice Shelf pond-associated circular DNA virus-6 (isolate: alg49-69)
Lineage
Viruses; ssDNA viruses; unclassified ssDNA viruses
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Genomic context

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Sequence:
NC_024482.1 (73..1053)

NC_024482.1Genomic Context describing neighboring genes Neighboring gene putative capsid protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024482.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Diverse small circular single-stranded DNA viruses identified in a freshwater pond on the McMurdo Ice Shelf (Antarctica). Zawar-Reza P, et al. Infect Genet Evol, 2014 Aug. PMID 24859088

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
replication-associated protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_024482.1 Reference assembly

    Range
    73..1053
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009047139.1 replication-associated protein [McMurdo Ice Shelf pond-associated circular DNA virus-6]

    See identical proteins and their annotated locations for YP_009047139.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A075LYS7
    Conserved Domains (3) summary
    smart00382
    Location:175 → 201
    AAA; ATPases associated with a variety of cellular activities
    pfam00910
    Location:179 → 271
    RNA_helicase; RNA helicase
    pfam02407
    Location:9 → 90
    Viral_Rep; Putative viral replication protein
Nucleotide Protein
Heading Accession and Version

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