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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001003933.2 → NP_001003933.1 reticulon-3 isoform 2
See identical proteins and their annotated locations for NP_001003933.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2, also known as RTN3-A2) lacks an alternate in-frame exon, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AC129188, AY427822, BY295849
- Consensus CDS
-
CCDS29525.1
- UniProtKB/Swiss-Prot
-
Q9ES97
- Related
- ENSMUSP00000085496.5, ENSMUST00000088171.12
- Conserved Domains (1) summary
-
- pfam02453
Location:757 → 921
- Reticulon; Reticulon
-
NM_001003934.2 → NP_001003934.1 reticulon-3 isoform 1
See identical proteins and their annotated locations for NP_001003934.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1, also known as Rtn3-A1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC129188, AY750849, BY295849
- Consensus CDS
-
CCDS37906.1
- UniProtKB/Swiss-Prot
- Q3UF62, Q544J1, Q68FE4, Q6IM69, Q6R8K6, Q6R8K7, Q6T929, Q8C6D5, Q8CCU2, Q9ES97
- Related
- ENSMUSP00000065810.6, ENSMUST00000065304.13
- Conserved Domains (1) summary
-
- pfam02453
Location:776 → 940
- Reticulon; Reticulon
-
NM_001271486.1 → NP_001258415.1 reticulon-3 isoform 5
See identical proteins and their annotated locations for NP_001258415.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) uses an alternate in-frame splice site, compared to variant 1. The encoded isoform (5) is shorter than isoform 1.
- Source sequence(s)
-
AC129188, AK032109, AY427822, BY295849
- Consensus CDS
-
CCDS89331.1
- UniProtKB/Swiss-Prot
-
Q9ES97
- Related
- ENSMUSP00000158024.2, ENSMUST00000235593.2
- Conserved Domains (1) summary
-
- pfam02453
Location:455 → 619
- Reticulon; Reticulon
-
NM_001271487.1 → NP_001258416.1 reticulon-3 isoform 6
See identical proteins and their annotated locations for NP_001258416.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6, also known as RTN3-B2) lacks an alternate in-frame exon, compared to variant 1. The encoded isoform (6) is shorter than isoform 1.
- Source sequence(s)
-
AC129188, AY750849, BY295849
- Consensus CDS
-
CCDS70927.1
- UniProtKB/Swiss-Prot
-
Q9ES97
- Related
- ENSMUSP00000025667.8, ENSMUST00000025667.14
- Conserved Domains (1) summary
-
- pfam02453
Location:68 → 232
- Reticulon; Reticulon
-
NM_053076.3 → NP_444306.1 reticulon-3 isoform 4
See identical proteins and their annotated locations for NP_444306.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4, also known as RTN3-B1) lacks two alternate in-frame exons, compared to variant 1. The encoded isoform (4) is shorter than isoform 1.
- Source sequence(s)
-
AC129188, AK036892, BY295849
- Consensus CDS
-
CCDS29526.1
- UniProtKB/Swiss-Prot
-
Q9ES97
- Related
- ENSMUSP00000085494.7, ENSMUST00000088169.7
- Conserved Domains (1) summary
-
- pfam02453
Location:49 → 213
- Reticulon
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000085.7 Reference GRCm39 C57BL/6J
- Range
-
7403260..7460656 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017318088.2 → XP_017173577.1 reticulon-3 isoform X1
- Conserved Domains (1) summary
-
- pfam02453
Location:48 → 212
- Reticulon
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001003930.1: Suppressed sequence
- Description
- NM_001003930.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.