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HELRODRAFT_99722 hypothetical protein [ Helobdella robusta ]

Gene ID: 20217843, updated on 28-Dec-2023

Summary

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Gene symbol
HELRODRAFT_99722
Gene description
hypothetical protein
Locus tag
HELRODRAFT_99722
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Helobdella robusta
Lineage
Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhynchobdellida; Glossiphoniidae; Helobdella
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Genomic context

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Location:
chromosome: Unknown
Exon count:
11

NW_008704310.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008704310.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into bilaterian evolution from three spiralian genomes. Simakov O, et al. Nature, 2013 Jan 24. PMID 23254933, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane protein ectodomain proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_008704310.1 Reference assembly

    Range
    450081..457030 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009019574.1 → XP_009017822.1  hypothetical protein HELRODRAFT_99722 [Helobdella robusta]

    See identical proteins and their annotated locations for XP_009017822.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    T1G9U7
    Conserved Domains (4) summary
    smart00608
    Location:296 → 427
    ACR; ADAM Cysteine-Rich Domain
    pfam00200
    Location:215 → 289
    Disintegrin; Disintegrin
    pfam01421
    Location:6 → 198
    Reprolysin; Reprolysin (M12B) family zinc metalloprotease
    cl00064
    Location:6 → 183
    ZnMc; Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which ...
Nucleotide Protein
Heading Accession and Version

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