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HELRODRAFT_99753 hypothetical protein [ Helobdella robusta ]

Gene ID: 20217846, updated on 28-Dec-2023

Summary

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Gene symbol
HELRODRAFT_99753
Gene description
hypothetical protein
Locus tag
HELRODRAFT_99753
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Helobdella robusta
Lineage
Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhynchobdellida; Glossiphoniidae; Helobdella
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Genomic context

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Location:
chromosome: Unknown
Exon count:
17

NW_008704310.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008704310.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into bilaterian evolution from three spiralian genomes. Simakov O, et al. Nature, 2013 Jan 24. PMID 23254933, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in autophagosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_008704310.1 Reference assembly

    Range
    926255..936892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009019631.1 → XP_009017879.1  hypothetical protein HELRODRAFT_99753 [Helobdella robusta]

    See identical proteins and their annotated locations for XP_009017879.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    T1G9V0
    Conserved Domains (5) summary
    COG2319
    Location:255 → 548
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:265 → 545
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam08614
    Location:11 → 208
    ATG16; Autophagy protein 16 (ATG16)
    sd00039
    Location:271 → 308
    7WD40; WD40 repeat [structural motif]
    cl23720
    Location:86 → 231
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases