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LD34_gp154 holin [ Escherichia phage vB_EcoM_PhAPEC2 ]

Gene ID: 20284392, updated on 8-Jan-2023

Summary

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Gene symbol
LD34_gp154
Gene description
holin
Locus tag
LD34_gp154
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia phage vB_EcoM_PhAPEC2
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Straboviridae; Tevenvirinae; Mosigvirus; Mosigvirus phapec2
Old locus tag
PhAPEC2_236
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Genomic context

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Sequence:
NC_024794.1 (158626..159285)

NC_024794.1Genomic Context describing neighboring genes Neighboring gene long tail fiber protein distal subunit Neighboring gene tail fiber protein; host specificity Neighboring gene anti-sigma factor Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024794.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A cocktail of in vitro efficient phages is not a guarantee for in vivo therapeutic results against avian colibacillosis. Tsonos J, et al. Vet Microbiol, 2014 Jul 16. PMID 24269008

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
holin
YP_009056828.1
  • similar to t holin lysis mediator (NP_049865.1) from Enterobacteria phage T4; pore protein for T4 e lysozyme, controlling lysis timing and lysis inhibition, functions with rI protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_024794.1 Reference assembly

    Range
    158626..159285
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009056828.1 holin [Escherichia phage vB_EcoM_PhAPEC2]

    See identical proteins and their annotated locations for YP_009056828.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A067ZJ34
    Conserved Domains (1) summary
    pfam11031
    Location:5 → 218
    Phage_holin_T; Bacteriophage T holin
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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