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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001308266.1 → NP_001295195.1 signal transducer and activator of transcription 4
See identical proteins and their annotated locations for NP_001295195.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein.
- Source sequence(s)
-
AK132675, BF020635
- Consensus CDS
-
CCDS14943.1
- UniProtKB/Swiss-Prot
-
P42228
- UniProtKB/TrEMBL
-
Q3V157
- Related
- ENSMUSP00000130713.2, ENSMUST00000168302.8
- Conserved Domains (4) summary
-
- cd10375
Location:553 → 700
- SH2_STAT4; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 4proteins
- smart00964
Location:2 → 121
- STAT_int; STAT protein, protein interaction domain
- pfam01017
Location:140 → 314
- STAT_alpha; STAT protein, all-alpha domain
- pfam02864
Location:316 → 562
- STAT_bind; STAT protein, DNA binding domain
-
NM_011487.5 → NP_035617.1 signal transducer and activator of transcription 4
See identical proteins and their annotated locations for NP_035617.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein.
- Source sequence(s)
-
AC108840, AK132675, BF020635, BY097735, BY750146
- Consensus CDS
-
CCDS14943.1
- UniProtKB/Swiss-Prot
-
P42228
- UniProtKB/TrEMBL
-
Q3V157
- Related
- ENSMUSP00000027277.6, ENSMUST00000027277.7
- Conserved Domains (4) summary
-
- cd10375
Location:553 → 700
- SH2_STAT4; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 4proteins
- smart00964
Location:2 → 121
- STAT_int; STAT protein, protein interaction domain
- pfam01017
Location:140 → 314
- STAT_alpha; STAT protein, all-alpha domain
- pfam02864
Location:316 → 562
- STAT_bind; STAT protein, DNA binding domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000067.7 Reference GRCm39 C57BL/6J
- Range
-
52026265..52146348
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006495815.2 → XP_006495878.1 signal transducer and activator of transcription 4 isoform X1
- UniProtKB/Swiss-Prot
-
P42228
- Conserved Domains (4) summary
-
- cd10375
Location:573 → 720
- SH2_STAT4; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 4proteins
- cd16854
Location:160 → 332
- STAT4_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription 4 (STAT4)
- cd16848
Location:336 → 493
- STAT4_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription 4 (STAT4)
- cl03749
Location:64 → 141
- STAT_int; STAT protein, protein interaction domain
-
XM_006495816.1 → XP_006495879.1 signal transducer and activator of transcription 4 isoform X2
- UniProtKB/Swiss-Prot
-
P42228
- Conserved Domains (4) summary
-
- cd10375
Location:502 → 649
- SH2_STAT4; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 4proteins
- cd16854
Location:89 → 261
- STAT4_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription 4 (STAT4)
- cd16848
Location:265 → 422
- STAT4_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription 4 (STAT4)
- cl03749
Location:14 → 70
- STAT_int; STAT protein, protein interaction domain